-- PROGRESSIVE (similarity) ALIGNMENT -- Blosum62 Sequences are entered in the following order: 1)ORFE ORF1ECO 2)YHFM YHFMECO 3)YKBA YKBABSU 4)POTE POTEECO 5)POTH POTEHIN 6)CADB CADBECO 7)YJDE YJDEECO 8)ORFS ORF1SCO 9)POTR POTERPR 10)ARPN ARCDCPN 11)ARTR ARCDCTR 12)ARLI ARCDBLI 13)ARPE ARCDCPE 14)ARAE ARCDPAE 15)ARCO ARCDECO 16)ARSK ARCDLSK 17)LYSI LYSICGL 18)YVSH YVSHBSU 19)ORFA ORF1ASA 20)YJEH YJEHECO ---- Alignment ---- *** (gap penalty = 6) *** YHFM M G S Q E ORFE G I G B A A A O R F O M T A N S P L Q R I G Q E K G I A M G S Q E YKBA M H T E D N G POTH M S A K POTE M S Q A K YJDE M S S D A D CADB M S S POTR M S ORFS M H V T G T V P P P A P E P R E T P A A P D H T T ARPN M T S R T K S ARTR M L L K K R S ARPE M A E Q H N ARLI M A E E ARAE M S Q E S ARCO M ARSK M T E E K LYSI M N T Q S D S YVSH M E Q ORFA M S A L YJEH M S G L YHFM L Q R K L G F W A V L A I A V G T T V G_S G I F V ORFE L Q R K L G F W A V L A I A V G T T V G_S G I F V YKBA L K K E I G L L F A L T L V I G T I I G_S G V F M POTH S N K I G V V Q L T I L T M V N M M G_S G I I M POTE S N K M G V V Q L T I L T M V N M M G_S G I I M YJDE A H K V G L I P V T L M V S G N I M G_S G V F L CADB A K K I G L F A C T G V V A G N M M G_S G I A L POTR Q K L S F W A V F A L V T G S Q I G_T S V F I ORFS L A D P A P G N G R H A R R F G L P V A T A L V M G N I I G_G G I F L ARPN S K N L G T I A L A G M V V S S I I G_G G I F S ARTR P T S I L G T L A L T G I V I S S M I G_G G I F S ARPE E P K K L G F A Q L A A L I V G S M I G_G G A F N ARLI K K L G L F A L I A L V I G S M I G_G G A F N ARAE S Q K L R L G A L T A L V V G S M I G_G G I F S ARCO E K K L G L S A L T A L V L S S M L G_A G V F S ARSK P A K K I G L L A L I A L V I S S S I G_S G V F G LYSI A G S Q G A A A T S R T V S I R T L I A L I I G S T V G_A G I F S YVSH T K K W G F W L L T A F V V G N M V G_S G I F S ORFA K K D L G L W Q R M G L L T T S L L G_T G I F V YJEH K Q E L G L A Q G I G L L S T S L L G_T G V F A YHFM S V G E V A K A A G T P W L T V L A F V I G G L I V I P Q M C V Y A E ORFE S V G E V A K A A G T A W L T V L A F V I G G L I V I P Q M C V Y A E YKBA K P G A V L A Y S G D S K M A L F A W L L G G I L T L A G G L T I A E POTH L P T K L A E I G T I S I V S W L V T A V G S T A L A Y A F A Q POTE L P T K L A E V G T I S I I S W L V T A V G S M A L A W A F A K YJDE L P A N L A S T G G I A I Y G W L V T I I G A L G L S M V Y A K CADB L P A N L A S I G G I A I W G W I I S I I G A M S L A Y V Y A R POTR L P L S L A P F G V Y S I W G W I L S L F G A M S I A L V F S C ORFS L P A S V A P F G T I S L L A F G V L T V G A I A L A L V F G R ARPN L P Q N M A A T A G A G A V I L S W I L T G F G M F F I A N T F R I ARTR L P Q N M V A S A S A G A V M L A W M L S G I G I F F I A N T F K T ARPE L P S D M A R G A G T G A V I I G W I I T G I G M I A L A F V Y Q S ARLI L A S D M A S G A G A G A I L I G W I I T G V G M I A L A F S F Q N ARAE L P Q N M A A S A D V G A V L I G W A I T A V G M L T L A F V F Q T ARCO L P Q N M A A V A S P A A L L I G W G I T G A G I L L L A F A M L I ARSK L T S D L A S A S A P G P V L I A W V I V G F G I L M L A L S L N N LYSI I P Q N I G S V A G P G A M L I G W L I A G V G M L S V A F V F H V YVSH L P S S L A S I A S P F G A T S A W L L T G A G V L M I A L V F G H ORFA V P A T A A S L A G G A S L W A W V L L I V L V L P I A F T F A R YJEH V P A L A A L V A G N N S L W A W P V L I I L V F P I A I V F A I YHFM L S T A Y P E N G A D Y V Y L K N A G S R P L A F L S ORFE L S T A Y P E N G A D Y V Y L K N A G S R P L A F L S YKBA I G T Q I P K T G G L Y T Y L E E V Y G E F W G F L C POTH C G M F S K K S G G M G G Y A E Y S F G K A G N F M A N Y POTE C G M F S R K S G G M G G Y A E Y A F G K S G N F M A N Y YJDE M S F L D P S P G G S Y A Y A R R C F G P F L G Y Q T N V CADB L A T K N P Q Q G G P I A Y A G E I S P A F G F Q T G V POTR L C T K F P K T G G P H V Y V R A S F G D T I A F F T G W ORFS L A A R D P H T G G P Y V Y A R G A F G D F A G F L A A W ARPN L S T I R P D L K E G I Y M Y S R E G F G P Y I G F T I G W ARTR L S I I R P D L K A G I Y T Y S R E G F G P Y V G F T I A W ARPE L A N R K P E L T G G V Y S Y A K G F G E Y I G F N S A W ARLI L T T K R P D L D G G I F T Y A R E G F G H F M G F N S G W ARAE L A N R K P E L D G G V Y A Y A K A G F G D Y M G F S S A W ARCO L T R I R P E L D G G I F T Y A R E G F G E L I G F C S A W ARSK L L M K E P E L E G I F S Y A E K G F G P F A G F I S G W LYSI L A R R K P H L D S G V Y A Y A R V G L G D Y V G F S S A W YVSH L S I R K P E L T A G P Q S Y A R A L F S D P K K G N A A G F T M V W ORFA L G R R Y P H A G G A P H L I G L A F G N G A E R F S A F YJEH L G R H Y P S A G G V A H F V G M A F G S R L E R V T G W YHFM G W A S F W A N D A P S L S I M A L A I V S N L G ORFE G W A S F W A N D A P S L S I M A L A I V S N L G YKBA G W V Q I I I Y G P A I I G A L G L Y F G S L M A N L F G POTH T Y G V S L V I A N T A I A I S A V G Y G S E L F G T POTE T Y G V S L L I A N V A I A I S A V G Y G T E L L G A YJDE L Y W L A C W I G N I A M V V I G V G Y L S Y F F P I CADB L Y Y H A N W I G N L A I G I T A V S Y L S T F F P V POTR T Y W I I S F V S T S I V V I S A I G Y L T P F F K ORFS A Y W I T T W V S N A A L A V A A V G Y L D V L I P V ARPN G Y W L C Q I F G N V G Y A V I T M D A L N Y F F P P ARTR G Y W L C Q I F G N V D Y A V I T M D A L N Y F F P P ARPE G Y W L S A W I G N V S Y S V L L F G A V G Y F L P M ARLI G Y W F A A L L G N V A Y G T L L F S A I G Y F I P A ARAE G Y W I S A W L G N V G Y F V L L F S T L G Y F F P I ARCO G Y W L C A V I A N V S Y L V I V F S A L S F F T D T ARSK G Y W L S A W L G N V T F A T I L M S A L G Y F F P LYSI G Y W L G S V I A Q V G Y A T L F F S T L G H Y V P YVSH G Y W V A S W I S N V A I I T S L A G Y L T S F F P I L V D ORFA L F L T V L P V G L P A A L T I A A G F W H A L F D L YJEH L F L S V I P V G L P A A L Q I A A G F G Q A M F G YHFM F L T P I D P L L G K F I A A G L I I A F M L L H L ORFE F L T P I D P L L G K F I A A G L I I A F M L L H L YKBA W G S G L S K V I G I I A V L F L C V I N I POTH I L S P L S I A L W T I F T L W L A T V L N F POTE S L S P V Q I G L A T I G V L W I C T V A N F YJDE L K D P L V L T I T C V V V L W I F V L L N I CADB L N D P V P A G I A C I A I V W V F T F V N M POTR S Q T I L D L I L Q L I L L A A I A I L N L ORFS N D H R W T A C L A A L V V Q W L P A L A N F ARPN Y F Q G G N T L P A I L G G S I L I W V F N F I V L ARTR Y F A G G N T I P A I L L G S L L I W I F N Y I V L ARPE F G A G N N V A S I I G A S V L L W A F T L L I L ARLI F G D G Q N I A S I I G A S V I L W C V H F L I L ARAE F G K G D T V A A I V C A S V L L W A L H F L V L ARCO P E L R L F G D G N T W Q S I V G A S A L L W I V H F L I L ARSK I F K S R Q N L P S I L V A S V L S W S L T Y F V N LYSI L F S Q D H P F V S A L A V S A L T W L V F G V V S YVSH K R E M F S I G G Q E V T L G Q L L T F A V C T I L L W G T H A I L V ORFA G E W T L W A I Q L L T L L G V F L L G L YJEH W H S W Q L L L A E L G T L A L V W Y I G T YHFM R S V E G G A A F Q T L I T I A K I I P F T I V I G L G I F W F K A ORFE R S V E G G A A F Q T L I T I A K I I P F T I V I G L G I F W F K A YKBA I G T K Y G G F V Q T L T T I G K L I P I A C I I V F G L W K G POTH G G A R I T G N I S S F T I W G V I I P V V G I S I I G W K W F D G POTE G G A R I T G Q I S S I T V W G V I I P V V G L C I I G W F W F S P YJDE V G P K M I T R V Q A V A T V L A L I P I V G I A V F G W F W F R G CADB L G G T W V S R L T T I G L V L V L I P V V M T A I V G W H W F D A POTR K G P K I A G K V E F Y L T L L K F V P L L V V G L A A L F H F N I ORFS A G T R W V G A V Q L V S T V L K F A P L L L V A V G G L F F F D A ARPN K G I R Q A S I I N V I G T I F K I I P L I I F I I L T A F F F K L ARTR R G I R Q A S F V N I I G A V C T L I P L L L F I L I T A R F F K F ARPE N G V S G A A L I N L I T T I A K L V P I F L F I V I S L F M F N F ARLI R G V Q S A A M I N L I T T I S K L V P I F A F I I A I I F V F H L ARAE R G I K E A A F I N T V T T V A K V V P L F L F I L I C L F A F K L ARCO R G V Q T A A S I N L V A T L A K L L P L G L F V V L A M M M F K L ARSK R G V E G A A A I N T L V T I C K L I P L F V F I I F G I V L F K G LYSI R G I S Q A A F L T T V T T V A K I L P L L C F I I L V A F L G F S W YVSH A S I N G A S K L N F V T T L S K V L G F V F F I V A G L F V F Q T ORFA R G A R S S G N L Q L L I A L A I L G L T L L I W F K G YJEH R G A S S S A N L Q T V I A G L I V A L I V A I W W A G YHFM E N F A A P T T T A I G A T G S F M A L L A G I S ORFE E N F A A P T T T A I G A T G S F M A L L A G I S YKBA D Q H I F T A V N E S I S D M N F G A A I L POTH S M Y V N S W N P H N V P T F E A I G V S I S POTE T L Y V D S W N P H H A P F F S A V G S S I A YJDE E T Y M A A W N V S G L G T F G A I Q S T L N CADB A T Y A A N W N T A D T T D G H A I I K S I L POTR D N I V I A K E V E N F T I P T I M G R V A L ORFS D N L G P F N A S G S G G I G A V S A A A A ARPN A V F K T D F W G H A V T K A Q P S L G S V S S Q L K G T M L ARTR S I F K T D F W G T A P Q H T L G S I G S Q L K S T M L ARPE D K F T F Q F W G T S D L G G I V T Q V K S T M L ARLI D L F T N D F W G K G L S L G S I G T Q V K S T M L ARAE D I F T A D I W G K S N P D L G S V M N Q V R N M M L ARCO D T F K L D F T G L A L G V P V W E Q V K N T M L ARSK H L F T Q A F W N N M S S S F V A G D V M S Q I K N C M M LYSI E K F T V D L W A R D G G V G S I F D Q V R G I M V YVSH S L F G H F Y F P V Q G E N G T S I G I G G Q V H N A A I ORFA D L S W R D A A Q P L P T A A E W P A M G T A L A YJEH D I K P A N I P F P A P G N I E L T G L F A A L S YHFM A T S W S Y T G_M A S I C Y M T G E I K N P G K T M P R A_L I G S C L ORFE A T S W S Y T G_M A S I C Y M T G E I K N P G K T M P R A_L I G S C L YKBA A T L F A Y D G_W I L L A A L G G E M K N P E K L L P R A_M T G G L L POTH M T L W A F L G_L E S A C A N A D A V E N P E K N V P I A_V L G G T L POTE M T L W A F L G_L E S A C A N T D V V E N P E R N V P I A_V L G G T L YJDE V T L W S F I G_V E S A S V A A G V V K N P K R N V P I A_T I G G V L CADB L C L W A F V G_V E S A A V S T G M V K N P K R T V P L A_T M L G T G POTR L T F W G F I G_I E C A T T T A G T V K D P A K T I P R A_I I I G T C ORFS I L L F S Y L G_V E S A A V S A G E V E D P R R T V G R A_T V I G T A ARPN V T L W A F I G_I E G A V V M S G R A K N P L S V G Q A_T V L G F L ARTR V T L W A F I G_I E G A V V I S G R A A N L S S V G K A_T I L G F S ARPE V T L W C F I G_I E G A V V S G R A K K Q S D V G K A_T V L G L I ARLI V T V W V F T G_I E G A V L F S S R A K K S S D V G K A_T V I G L I ARAE V T V W V F I G_I E G A S I F S S R A E K R S D V G K A_T V I G F I ARCO I T L W V F I G_V E G A V V V S A R A R N K R D V G K A_T L L A V L ARSK V M M W V F V G_I E G A S M L S A R A E K K S D A G K A_T I L G L V LYSI Y T V W V F I G_I E G A S V Y S R Q A R S R S D V S R A_T V I G F V YVSH S T L W A F V G_I E S A V I L S G R A R S Q R D V K R A_T I T G L L ORFA V M F W C F V G_L E A F A H M G E E F K R P E R D Y P L A_L L G G V L YJEH V M F W C F V G_L E A F A H L A S E F K N P E R D F P R A_L M I G L L YHFM L V L V L Y T L L A L V I S G L M P F D K L A N S E T P I S D A L ORFE L V L V L Y T L L A L V I S G L M P F D K L A N S E T P I S D A L YKBA I V T A I Y I F I N F A L L H I L S A N E I V T L G E N A T S T A A POTH G A A V I Y I V S T N V I A G I V P N L E L A N S T A P F G L A F POTE G A A V I Y I V S T N V I A G I V P N M E L A N S T A P F G L A F YJDE I A A V C Y V L S T T A I M G M I P N A A L R V S A S P F G D A A CADB L A G I V Y I A A T Q V L S G M Y P S S V M A A S G A P F A I S A POTR C V A F L Y I I N S I G I I G L I P A S E L I N S K A P Y A D A A ORFS G A A L V Y L L G T L S V F G T V A H D R L V T S D A P F S D A V ARPN G C L T I Y I L F S L L P F G S L F Q H Q L A N I P N P S T A G V L ARTR G C L L I Y V L L S L L P F G S L F Q Y Q L A K I A D P S T A G V L ARPE G T L I I Y M L I T L M A L G V M D R V K L S G L E N P S M A Y V L ARLI S V L V I Y V M I T M L S L G V M N Q Q N L A E L P N P S M A A I M ARAE T V L L L L V L V N V L S M G V M T Q P E L A K L Q N P S M A L V L ARCO S A L G V Y L L V T L L S L G V V A R P E L A E I R N P S M A G L M ARSK S L L A I Y I L A S V L P Y G Y L T Q D Q L A S I K Q P A M L Y I F LYSI A V L L L L V S I S S L S F G V L T Q Q E L A A L P D N S M A S V L YVSH I A L S I Y I I V T L I T M G V L P H D K L V G S E K P F V D V L ORFA L A G L I Y W V H S L V V L K Y G L Y G D E A K N A T A I P A L L YJEH L A G L V Y W G C T V V V L H F D A Y G E K M A A A A S L P K I V YHFM T W I P A L G S T A G I F V A I T A M I V I L G S L S S C V M Y Q P R ORFE T W I P A L G S T A G I F V A I T A M I V I L G S L S S C V M Y Q P R YKBA T M L F G S I G G K L I S V G I I V S I F G C L N G K V L S F P R POTH A H M F D E T V G K V I M G L M V M S C F G S L L G W Q F T I A Q POTE A Q M F T P E V G K V I M A L M V M S C C G S L L G W Q F T I A Q YJDE R M A L G D T A G A I V S F C A A A G C L G S L G G W T L L A G Q CADB S T I L G N W A A P L V S A F T A F A C L T S L G S W M M L V G Q POTR T L L F G G T W S K V I T V I A S V I C I G T L N A W V L T S G Q ORFS N A M F G G A W G G W A V A L A A L V S M T G C L N G W T L L S A Q ARPN D I L V G K W G E V L M N V G L I I A V L S S W L S W T I I V A E ARTR N I L V G K W G E V L M N T G L L I A V L T S W L S W T I L A S E ARPE E F A V G K W G A V L I N L G L I I S L F G S L L G W A L L A A E ARLI E H I V G K W G A V L I N L G L I I S V L G A W L A W T L F A G E ARAE E H V V G H W G A V L I S V G L L I S L L G A L L S W V L L C A E ARCO V E M M G P W G E I I I A A G L I V S V C G A Y L S W T I M A A E ARSK E Q M V G T W G G Y F I G V G L I I S I L G A W L S W T M L P A E LYSI E A V V G P W G A A L I S L G L C L S V L G A Y V S W Q M L C A E YVSH Y A I V G N A G S V I M A L L A I L C L F G T M L G W I L L G S E ORFA S L L F G P T A K W L V A I L G Y L S C F G S I N I Y L Q G F A R YJEH V Q L F G V G A L W I A C V I G Y L A C F A S L N I Y I Q S F A R YHFM L E Y A M A K D N L F F K C F G H V H P K Y N T P D V S ORFE L E Y A M A K D N L F F K C F G H V H P K Y N T P D V S YKBA V S F A M A E R K Q L P F A E K L S H V H P S F R T P W I A POTH V F K S S A E E G Y F P A F F K K I T S K D A P V V G M I T I POTE V F K S S S D E G Y F P K I F S R V T K V D A P V Q G M L T I YJDE T A K A A A D D G L F P P I F A R V N K A G T P V A G L I I V CADB A G V R A A N D G N F P K V Y G E V D S N G I P K K G L L L A POTR I A L G L A E D G L L P K F F A K K N S N N A P T Y G I I I S ORFS T P Y A A A R D G L F P A A F A R K R R G V P T T G V G V T ARPN I P F S A A K N G T F P E I F T I E N K E K S P S V S L Y I T ARTR I P Y A A A K N G T F P E C F A I E N S K H A P S F S L F M T ARPE I P Y V A A K D G V L P K V F A K L N K K G T P S G S L I I T ARLI L P L I A A R E G V F P K W F G K E N K N G A P T N A L T L T ARAE I M F A A A K D H T M P E F L R R E N A N Q V P A N A L W L T ARCO V P F L A A T H K A F P R I F A R Q N A Q A A P S A S L W L T ARSK T M L L M A K Q N L L P A Y F G R V N K K K A P T F A L V V T LYSI P L A L M A M D G L I P S K I G A I N S R G A A W M A Q L I S YVSH V P Y Q A A K A G D F P A F F A K T N K K G S P V I A L I I T ORFA L I W S M A R E G K L P T S L A R L S A R G A P L N A L C W V L YJEH L V W S Q A Q H N P D H Y L A R L S S R H I P N N A L N A V L YHFM I I L Q G A L G I F F I F V S D L T S L L G Y F T L V M ORFE I I L Q G A L G I F F I F V S D L T S L L G Y F T L V M YKBA I S F Q I A L A L I M M L I S N P D K L S E I S I F M I Y I POTH T A L Q T L L S L M T I S P S L N K Q F N V L V D L A V V T N POTE V I I Q S G L A L M T I S P S L N S Q F N V L V N L A V V T N YJDE G I L M T I F Q L S S I S P N A T K E F G L V S S V S V I F T CADB A V K M T A L M I L I T L M N S A G G K A S D L F G E L T G I A V POTR C L G I T P L L L F T S N N N F A K Q I T Q I I D F S V I A F ORFS V V L A S L L T V Y N Y T S G S A K V F E V L V L V T T F T A ARPN S S V M Q L A M L L V Y F S S N A W N T M L S I T G V M ARTR S G L M Q I T M L L V Y F S S N A W N T M L E I T G V M ARPE N L L V Q A F L I L T L V V S S T Y Q A L Y S V A S T A I ARLI N A I I Q L F L L T F L I S D A A Y Q F A F S L A S S A I ARAE N I C V Q V F L V V V F F T S G D P D G M D P Y T K M L L L A T S M I ARCO N I C V Q I C L V L I W L T G S D Y N T L L T I A S E M I ARSK A G L I Q V F L F T L L F T T K A Y N F A Y S L C T A S I LYSI T I V I Q I F I I I F F L N E T T Y V S M V Q L A T N L Y YVSH N V M S Q V F I F S V I S R T I S D A F T F L T T A A T L A Y ORFA A I C L V S I T L I L W L R L P L D E L I R Y A N G N F YJEH G C C V V S T L V I H A L E I N L D A L I I Y A N G I F YHFM C F K N T L T F G S I I W C R K R D D Y K P ORFE C F K N T L T F G S I I W C R K R D D Y K P YKBA F Y V M A F F A V F I L R K R A K G E K R POTH V I P Y L L S M A A L A V L L K A E N V A P Q POTE I I P Y I L S M A A L V I I Q K V A N V P P S YJDE L V P Y L Y T C A A L L L L G H G H F G CADB L L T M L P Y F Y S C V D L I R F E POTR L F V Y L I C S L A F L K V I F S S ORFS T V P Y L L A T A A Q I F H L V S G Q G E R V D ARPN V L P A Y L A S A A F L F K L S K S K T Y P K ARTR V L P A Y L T S S L F L V K F S L S K K Y P K ARPE L V P Y L L S A M Y G F K L A L T G E T Y D K N P ARLI L I P Y L F S G L Y Q L K Y S W ARAE L I P Y F W S A A Y G L L L T L K G E T Y E N D A ARCO L V P Y F L V G A F L L ARSK I V C Y M L V A A Y Q I K Y S W A H L Q E K G LYSI L V P Y L F S A F Y L V M L A T R G K G I T H P H A G T R F D D S G P YVSH L I P Y L V S A I Y S L K V V I K G E T Y D Q L K ORFA V L V Y L L C M A A G W R L L YJEH I M I Y L L C M L A G C K L L YHFM L W R T P A F G L M T T L A I A S S L I L V A S T F V W A P I P G L ORFE L W R T P A F G L M T T L A I A S S L I L V A S T F V W A P I P G L YKBA A Y S V P L Y P F M P I L A I A G S F F V L G S T L I T D T M S C G L POTH K Y K T T V F V A F I G S L Y S I Y A L Y A A G E Q A M POTE K A K V A N F V A F V G A M Y S F Y A L Y S S G E E A M YJDE K A R P A Y L A V T T I A F L Y C I W A V V G S G A K E V M W S F CADB G V N I R N F V S L I C S V L G C V F C F I A L M G A S S F E L POTR K E N F S Y Y Y L F V A I I S I I F C T W V I Y K T P F E T L ORFS R A R L V R D G I A A S V A A A F S L W L V A G A G Y A A V ARPN K G S I K A P L A M I T G I L G V V Y S L W L I Y A G G L K Y L ARTR Q A A I K A R I A M I T S L L G S L Y S L W L I Y A G G L Q H L ARPE T G R T R D K I F G G I A T V Y A I W L C Y A A E L K Y L ARLI L H K E P N R G K N L I I G I I A S I Y G V W L V Y A A G L D Y L ARAE R E R S K D L V I A G I A V A Y A V W L L Y A G G L K Y L ARCO K I A T R P L H K A V G V G A C I Y G L W L L Y A S G P M H L ARSK N R Q Q L L I G V L A L L F E I A G I L M A G V S Y L LYSI E I S R R E N R K H L I V G L V A T V Y S V W L F Y A A E P Q F V YVSH G S R V R D G L I A I L A C A Y S V F V I V T G T A D L T T F ORFA G G M G K G L A G L S V L L C L A V L V A L A S Q YJEH Q G R Y R L L A V V G G L L C V L L L A M V G W K YHFM I C A V I V I A T G L P A Y A F W A K R S R Q L N A L S ORFE I C A V I V I A T G L P A Y A F W A K R S R Q L N A L S YKBA S I L I G L A G L P V Y Y G M K K R K A S POTH L Y G S I V T F I G W T L Y G F V S Y K F D L K K POTE L Y G S I V T F L G W T L Y G L V S P R F E L K N K H G YJDE V T L M V I T A M Y A L N Y N R L H K N P Y P L D A P I S K D CADB A G T F I V S L I I L M F Y A R K M H E R Q S H S M D N H T A S N A H POTR I I A C S F T I L G I P V Y Y G W Y R L M N R I K L ORFS Y Q G V L F L F A G V L V Y A V M A A R R R R A E T S N A P ARPN F M A L V L L A L G I P F Y I D A G K K K K N A K T F F A K K E I ARTR F M V A I L L A L G I P F Y V D S G I R H K Q E K T F L N R K E I ARPE L L C F I L Y A V G I I F F Y I G K K Q N N K D A E V F V G K E K I ARLI L L T M I L Y A P G I L V F R A V R K G K E G P V F N K A E L L ARAE L L S A L L Y A P G A I L F A K A K H E V G Q P I F T G I E K L ARCO L L S V V L Y A P G L L V F L Y A R K T H T H D N V L N R Q E M ARSK L L C F I A Y I P G I Y F Y G R A R K N N G H Q H F L S K G E W LYSI L F G A M A M L P G L I P Y V W T R I Y R G E Q V F N R F E I G YVSH I L G I G L F F V G L I V Y P F V S N K F Q K E K Q A ORFA V F Y A V L L S A G Y G L F S L W R R Y L R R T R A T E N I C A I YJEH S L Y A L I M L A G L W L L L P K R K T P E N G I T T YHFM ORFE YKBA POTH POTE YJDE CADB POTR ORFS ARPN V G M T F I G L L A L T A I F L F L T G R I K I ARTR L K M T I V A L A A L L A I F L F S A N K I H L ARPE L A I I V L V I A I I A I V M L F N G T I T I ARLI I A A L I L V L A V I A V I R L A S G S I S I ARAE I F A A V V I G A L V A A Y G L Y D G F L T L ARCO V L I G M L L I A S V P A T W M L V G ARSK L I T T I I V I G A I I G I W L V V S G K I V I LYSI V V V V L V V A A S A G V I G L V N G S L S L YVSH ORFA K YJEH -- Results -- Length of sequences with gaps = 584 Average sequence length: 458 Percent identity (based on aligned regions): YHFM ORFE YKBA POTH POTE YJDE CADB POTR ORFS ARPN ARTR ARPE ARLI ARAE ARCO ARSK LYSI YVSH ORFA YJEH YHFM 0.00 99.78 29.18 21.62 20.24 24.76 22.04 22.12 24.88 21.86 19.35 22.82 20.90 19.81 18.73 21.28 19.72 22.66 22.92 19.49 ORFE 99.78 0.00 29.18 21.62 20.24 24.76 22.04 22.12 23.87 21.86 19.35 22.82 20.90 19.81 18.98 21.28 19.72 22.66 22.92 19.49 YKBA 29.18 29.18 0.00 23.49 21.50 22.36 19.51 21.87 22.97 22.67 18.38 21.50 20.05 19.38 19.20 21.36 16.59 19.66 20.98 21.30 POTH 21.62 21.62 23.49 0.00 77.08 33.73 28.94 28.03 27.70 22.30 19.48 23.29 22.49 20.05 21.76 21.62 17.80 25.41 23.93 20.30 POTE 20.24 20.24 21.50 77.08 0.00 32.40 29.14 24.88 28.14 21.40 18.84 21.63 23.04 20.32 23.54 20.24 17.67 24.83 22.56 19.95 YJDE 24.76 24.76 22.36 33.73 32.40 0.00 38.37 28.27 33.49 25.40 24.02 28.44 26.35 25.23 27.64 24.71 20.37 28.50 20.30 20.85 CADB 22.04 22.04 19.51 28.94 29.14 38.37 0.00 24.94 26.81 24.48 22.63 24.65 25.29 20.97 23.28 23.24 21.25 24.07 20.05 21.75 POTR 22.12 22.12 21.87 28.03 24.88 28.27 24.94 0.00 27.86 23.99 20.67 25.36 25.12 24.41 21.41 20.67 20.62 27.19 21.86 20.10 ORFS 24.88 23.87 22.97 27.70 28.14 33.49 26.81 27.86 0.00 23.04 24.83 28.14 25.00 26.33 25.24 23.42 23.25 30.16 23.63 21.75 ARPN 21.86 21.86 22.67 22.30 21.40 25.40 24.48 23.99 23.04 0.00 70.83 40.72 40.60 39.45 41.52 37.42 30.93 30.73 20.29 19.46 ARTR 19.35 19.35 18.38 19.48 18.84 24.02 22.63 20.67 24.83 70.83 0.00 37.87 38.01 39.02 40.18 36.34 31.14 31.03 19.57 17.98 ARPE 22.82 22.82 21.50 23.29 21.63 28.44 24.65 25.36 28.14 40.72 37.87 0.00 56.96 52.44 45.37 39.39 38.03 38.30 21.03 18.20 ARLI 20.90 20.90 20.05 22.49 23.04 26.35 25.29 25.12 25.00 40.60 38.01 56.96 0.00 51.30 46.65 45.27 39.78 34.03 19.76 18.36 ARAE 19.81 19.81 19.38 20.05 20.32 25.23 20.97 24.41 26.33 39.45 39.02 52.44 51.30 0.00 45.54 38.12 44.16 34.31 20.82 20.99 ARCO 18.73 18.98 19.20 21.76 23.54 27.64 23.28 21.41 25.24 41.52 40.18 45.37 46.65 45.54 0.00 38.34 35.78 30.44 23.24 20.44 ARSK 21.28 21.28 21.36 21.62 20.24 24.71 23.24 20.67 23.42 37.42 36.34 39.39 45.27 38.12 38.34 0.00 31.70 29.82 19.37 19.95 LYSI 19.72 19.72 16.59 17.80 17.67 20.37 21.25 20.62 23.25 30.93 31.14 38.03 39.78 44.16 35.78 31.70 0.00 29.61 19.66 17.85 YVSH 22.66 22.66 19.66 25.41 24.83 28.50 24.07 27.19 30.16 30.73 31.03 38.30 34.03 34.31 30.44 29.82 29.61 0.00 21.13 18.02 ORFA 22.92 22.92 20.98 23.93 22.56 20.30 20.05 21.86 23.63 20.29 19.57 21.03 19.76 20.82 23.24 19.37 19.66 21.13 0.00 49.75 YJEH 19.49 19.49 21.30 20.30 19.95 20.85 21.75 20.10 21.75 19.46 17.98 18.20 18.36 20.99 20.44 19.95 17.85 18.02 49.75 0.00 Distance scores for phylogenetic tree: YHFM ORFE YKBA POTH POTE YJDE CADB POTR ORFS ARPN ARTR ARPE ARLI ARAE ARCO ARSK LYSI YVSH ORFA YJEH YHFM 0.00 4.56 104.22 148.73 150.55 135.16 149.36 139.10 142.64 152.19 161.65 144.53 149.99 163.50 163.54 160.72 163.66 149.13 156.47 174.29 ORFE 4.56 0.00 108.17 152.81 154.62 139.12 153.35 143.20 143.84 155.81 165.27 148.18 153.68 167.12 166.73 164.34 167.19 152.84 160.37 178.50 YKBA 104.22 108.17 0.00 144.68 150.75 147.85 161.36 145.67 148.37 153.75 167.39 154.31 163.22 166.04 167.51 165.78 175.76 166.95 157.91 165.45 POTH 148.73 152.81 144.68 0.00 23.25 95.25 113.98 116.97 128.95 147.92 154.61 139.15 147.87 151.86 153.42 153.46 166.82 135.06 139.23 160.48 POTE 150.55 154.62 150.75 23.25 0.00 94.88 108.29 122.73 123.33 148.23 156.74 139.58 145.61 147.91 143.87 156.71 162.53 132.46 144.59 160.28 YJDE 135.16 139.12 147.85 95.25 94.88 0.00 83.28 111.75 105.35 131.21 139.93 115.73 126.54 130.89 132.52 133.56 149.39 122.46 153.92 164.66 CADB 149.36 153.35 161.36 113.98 108.29 83.28 0.00 117.83 125.12 134.23 142.26 131.83 133.55 141.46 141.23 144.43 153.08 132.67 156.77 157.76 POTR 139.10 143.20 145.67 116.97 122.73 111.75 117.83 0.00 119.38 137.74 152.98 132.54 137.20 137.30 147.90 156.59 153.27 125.87 137.45 152.76 ORFS 142.64 143.84 148.37 128.95 123.33 105.35 125.12 119.38 0.00 136.78 136.55 120.59 132.17 132.88 136.89 136.38 145.76 117.56 160.61 168.60 ARPN 152.19 155.81 153.75 147.92 148.23 131.21 134.23 137.74 136.78 0.00 26.17 74.86 73.78 80.68 76.14 84.65 101.37 116.49 172.91 166.48 ARTR 161.65 165.27 167.39 154.61 156.74 139.93 142.26 152.98 136.55 26.17 0.00 80.57 79.52 82.97 79.08 86.47 104.46 116.94 181.63 179.85 ARPE 144.53 148.18 154.31 139.15 139.58 115.73 131.83 132.54 120.59 74.86 80.57 0.00 48.18 52.35 74.57 76.81 81.45 91.73 157.71 166.35 ARLI 149.99 153.68 163.22 147.87 145.61 126.54 133.55 137.20 132.17 73.78 79.52 48.18 0.00 56.77 66.16 69.43 77.21 102.19 171.59 171.52 ARAE 163.50 167.12 166.04 151.86 147.91 130.89 141.46 137.30 132.88 80.68 82.97 52.35 56.77 0.00 72.07 81.12 73.63 101.41 161.83 162.66 ARCO 163.54 166.73 167.51 153.42 143.87 132.52 141.23 147.90 136.89 76.14 79.08 74.57 66.16 72.07 0.00 83.47 91.84 108.10 155.62 161.81 ARSK 160.72 164.34 165.78 153.46 156.71 133.56 144.43 156.59 136.38 84.65 86.47 76.81 69.43 81.12 83.47 0.00 97.77 110.88 171.78 165.87 LYSI 163.66 167.19 175.76 166.82 162.53 149.39 153.08 153.27 145.76 101.37 104.46 81.45 77.21 73.63 91.84 97.77 0.00 119.31 174.97 183.67 YVSH 149.13 152.84 166.95 135.06 132.46 122.46 132.67 125.87 117.56 116.49 116.94 91.73 102.19 101.41 108.10 110.88 119.31 0.00 158.62 176.56 ORFA 156.47 160.37 157.91 139.23 144.59 153.92 156.77 137.45 160.61 172.91 181.63 157.71 171.59 161.83 155.62 171.78 174.97 158.62 0.00 67.64 YJEH 174.29 178.50 165.45 160.48 160.28 164.66 157.76 152.76 168.60 166.48 179.85 166.35 171.52 162.66 161.81 165.87 183.67 176.56 67.64 0.00 Branching order: (YHFM,ORFE)YKBA)POTH)POTE)YJDE)CADB)POTR)ORFS)ARPN)ARTR)ARPE) ARLI)ARAE)ARCO)ARSK)LYSI)YVSH)ORFA)YJEH) Clusters: (POTH,POTE)YJDE)CADB)POTR)ORFS)ARPN)ARTR)ARPE)ARLI)ARAE)ARCO) ARSK)LYSI)YVSH) (ARPN,ARTR)ARPE)ARLI)ARAE)ARCO)ARSK)LYSI)YVSH) (ARPE,ARLI)ARAE)ARCO)ARSK) (ORFA,YJEH) (YJDE,CADB) A)YHFM YHFMECO B)ORFE ORF1ECO C)YKBA YKBABSU D)POTH POTEHIN E)POTE POTEECO F)YJDE YJDEECO G)CADB CADBECO H)POTR POTERPR I)ORFS ORF1SCO J)ARPN ARCDCPN K)ARTR ARCDCTR L)ARPE ARCDCPE M)ARLI ARCDBLI N)ARAE ARCDPAE O)ARCO ARCDECO P)ARSK ARCDLSK Q)LYSI LYSICGL R)YVSH YVSHBSU S)ORFA ORF1ASA T)YJEH YJEHECO Branch lengths: (r1,r2,r3,r4,r5) (r6,r7,........) 0.45 4.11 48.86 55.06 26.24 11.84 11.41 44.08 36.96 46.32 5.75 8.39 57.38 3.27 57.73 1.70 9.65 16.52 29.73 22.00 26.18 0.56 29.91 6.41 38.12 0.68 42.89 0.62 -0.15 51.13 18.83 49.43 19.23 4.77 52.99 29.83 37.81 % s.d. (observed vs calculated) = 4.33