Dictyostelium ABC gene family

Phylogenic trees can be inspected by clicking on the name of the gene family

Family Size ABC domain location GenBank accession number
ABCA 12 members
ABCA.1(abcA) 877 aa 584-764 AF491005
ABCA.2 1621 aa 513-693; 1324-1504 AF465304
ABCA.3 1702aa 529-711; 1323-1503 (909-1146) AF465305
ABCA.4 1608 aa 514-696; 1317-1497 AF465306
ABCA.5 1662 aa 534-715; 1353-1533 AF465307
ABCA.6 1631 aa 520-700; 1340-1520 AF465308
ABCA.7 839 aa 552-732 AF465309
ABCA.8 826 aa 546-726 AF465310
ABCA.9 > 572 aa 285-465 AF465311
ABCA.10 887aa 512-704 AF465312
ABCA.11 > 805 aa 459-640 AF465313
ABCA.12 > 206 aa Not found AF491005
 
ABCB 9 members
Tag A 1702 aa 1406-1596 AF263455
Tag B 1905 aa 1546-1732 U20432
Tag C 1743 aa 1478-1663 U60086
Tag D 1825 aa 1604-1789 AF466309
ABCB1 909 aa 694-878 AF466304
ABCB.2 1407 aa 512-696; 1197-1381 AF466305
ABCB.3 1433 aa 542-726; 1220-1404 AF466306
ABCB.4 767 aa 552-736 AF466307
ABCB.5 697 aa 486-670 AF466308
 
ABCC 14 members
ABCC.1 1359 aa 495-680; 1143-1326 AF474333
ABCC.2 1357 aa 503-674; 1137-1320 AF474334
ABCC.3 1390 aa 444-622; 1067-1250 AF474335
ABCC.4 >1247 aa 438-616; 1056-1239 AF474336
ABCC.5 1460 aa 628-759; 1237-1420 AF474337
ABCC.6 1351 aa 503-677; 1127-1312 AF474338
ABCC.7 1308 aa 463-640; 1090-1272 AF474339
ABCC.8 1593 aa 620-794; 1371-1554 AF474340
ABCC.9 1345 aa 507-673; 1130-1314 AF474341
ABCC.10 1334 aa 451-629; 1079-1263 AF474342
ABCC.11 >518 aa 37-209 AF474343
ABCC.12 >1263 aa 453-637;1074-1256 AF474344
ABCC.13 >669 aa 449-632 AF474345
ABCC.14 1317 aa 515-690; 1097-1282 AY082376
 
ABCD 3 members
ABCD.1 >530aa 314-495 AY077632
ABCD.2 741 aa 544-721 AY077633
ABCD.3 >377 aa Not found AY077632
 
ABCE 1 member
ABCE.1 603 aa 103-292; 373-539 AY077634
 
ABCF 4 members
ABCF.1 708 aa 207-402; 519-683 AF479253
ABCF.2 590 aa 78-270; 392-559 AF479254
ABCF.3 643 aa 113-321; 435-605 AF479255
ABCF.4 1142 aa 629-833; 949-1115 AF479256
 
ABCG 21 members
ABCG.1 801 aa 149-340 AF482380
ABCG.2 1328 aa 84-275; 748-936 AF482381
ABCG.3 > 1260 aa 137-329;822-1011 AF482382
ABCG.4 770 aa 246-446 AF482383
ABCG.5 1509 aa 161-352;928-1117 AF482384
ABCG.6 1520 aa 156-347; 939-1128 AF482385
ABCG7 > 815 aa 267-461 AF482386
ABCG.8 626 aa 83-276 AF482387
ABCG.9 1448 aa 163-361; 851-1041 AF482388
ABCG.10 1466 aa 436-628 AF482389
ABCG.11 1441 aa 151-349; 837-1027 AF482390
ABCG.12 638 aa 84-277 AF482387
ABCG.13 1449 aa 162-359; 847-1037 AF482391
ABCG.14 1439 aa 148-346; 834-1024 AF482392
ABCG.15 1447 aa 182-380;872-1062 AF482393
ABCG.16 >1115 aa 198-388; 871-1060 AF482394
ABCG.17 1476 aa 180-378; 867-1057 AF482395
ABCG.18 1476 aa 98-288; 841-1029 AF482381
ABCG.19 1449 aa 162-359; 847-1037 AF482396
ABCG.20 730 aa 40-226 AF482397
ABCG.21 1449 aa 162-359;847-1037 AF482398
 
ABCH 4 members
ABCH.1 267 aa 49-237 AF482960
ABCH.2 513 aa 68-256 AF482961
ABCH.3 1118 aa 484-1106* AF482962
ArsA 329 aa 19-196 AF482963

* ABCH.3 contains a large insert in the ABC domain and was not used for alignment.